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Pull requests: nf-core/modules

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Pull requests list

Mirtrace topics migration
#12183 opened Jun 26, 2026 by EfraMP Member Loading…
8 of 17 tasks
feat: add methylsieve module new module Adding a new module Ready for Review
#12182 opened Jun 26, 2026 by nh13 Member Loading…
6 tasks done
feat: add dupblaster module new module Adding a new module Ready for Review
#12181 opened Jun 26, 2026 by nh13 Member Loading…
6 tasks done
feat: add refsolver modules (identify, compare, score) new module Adding a new module Ready for Review
#12180 opened Jun 26, 2026 by nh13 Member Loading…
6 tasks done
new module: cellpheno/nis
#12179 opened Jun 26, 2026 by Chrisa142857 Loading…
9 of 12 tasks
1
feat: add fgumi modules and bump fgumi family to 0.4.0 new module Adding a new module Ready for Review update module
#12178 opened Jun 26, 2026 by nh13 Member Loading…
6 tasks done
feat: add ferrohgvs modules (parse and normalize) new module Adding a new module Ready for Review
#12177 opened Jun 26, 2026 by nh13 Member Loading…
6 tasks done
feat: add holodeck modules (simulate, mutate, methylate, eval) new module Adding a new module Ready for Review
#12176 opened Jun 26, 2026 by nh13 Member Loading…
6 tasks done
feat: add minibwa modules (index and map) new module Adding a new module Ready for Review
#12175 opened Jun 26, 2026 by nh13 Member Loading…
6 tasks done
feat: add bwamem3 modules (index and mem) new module Adding a new module Ready for Review
#12174 opened Jun 26, 2026 by nh13 Member Loading…
6 tasks done
fix(custom/orfnormalise): treat ribotish GenomePos start as 0-based
#12173 opened Jun 26, 2026 by pinin4fjords Member Loading…
2 tasks done
3
Add finaletoolkit/mds
#12171 opened Jun 26, 2026 by lbeltrame Contributor Loading…
12 of 17 tasks
@lbeltrame
add pixi env size/s
#12165 opened Jun 25, 2026 by matthdsm Contributor Loading…
17 tasks
7
Modules : add kled
#12159 opened Jun 24, 2026 by tetedange13 Contributor Loading…
11 of 14 tasks
1
add DotMatch modules
#12156 opened Jun 23, 2026 by dnncha • Draft
feat: mako module new module Adding a new module Ready for Review
#12155 opened Jun 23, 2026 by emmcauley Contributor Loading…
10 of 17 tasks
1
4
Fix: Update Cellranger/multi to reinclude functionality from previous PR update size/m
#12152 opened Jun 23, 2026 by mahesh-panchal Member Loading…
1 of 17 tasks
3
style: add publication metadata to multiqcsav module
#12151 opened Jun 23, 2026 by maxulysse Member Loading…
Fix flag logic in caddsv-get Ready for Review size/s
#12150 opened Jun 23, 2026 by manascripts Member Loading…
11 of 17 tasks
style: add publication metadata to multiqc module
#12149 opened Jun 23, 2026 by maxulysse Member Loading…
style: add publication metadata to fastqe module
#12148 opened Jun 23, 2026 by maxulysse Member Loading…
style: add publication metadata to fastp module
#12147 opened Jun 23, 2026 by maxulysse Member Loading…
style: add publication metadata to checkqc module
#12146 opened Jun 23, 2026 by maxulysse Member Loading…
style: add publication metadata to sequali module
#12145 opened Jun 23, 2026 by maxulysse Member Loading…
style: add publication metadata to all seqkit modules
#12144 opened Jun 23, 2026 by maxulysse Member Loading…
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