Search results

Septop tutorial inquiry

Status: Open.

#315 In OpenFreeEnergy/ExampleNotebooks;

· priscilladuggan4 opened on Jun 19, 2026

add openfe stack tour content (hybrid top & septop example)

Status: Open.

#314 In OpenFreeEnergy/ExampleNotebooks;

· atravitz opened on Jun 18, 2026

Merge cinnabar-absolute and cinnabar RBFE plotting docs

Status: Open.

#313 In OpenFreeEnergy/ExampleNotebooks;

· jthorton opened on Jun 15, 2026

Update or remove analysis notebooks for ABFE and SepTop?

Status: Open.

#298 In OpenFreeEnergy/ExampleNotebooks;

· IAlibay opened on Mar 17, 2026

add headers to notebooks

Status: Open.

#292 In OpenFreeEnergy/ExampleNotebooks;

· atravitz opened on Feb 11, 2026

update Create an Alchemical Network notebook to not use to_rbfe_alchemical_network

Status: Open.

#290 In OpenFreeEnergy/ExampleNotebooks;

· atravitz opened on Feb 6, 2026

turn off md sim running in example notebook

Status: Open.

#288 In OpenFreeEnergy/ExampleNotebooks;

· atravitz opened on Feb 6, 2026

do we still want a colab link on PRs now what we have ReviewNB?

Status: Open.

#279 In OpenFreeEnergy/ExampleNotebooks;

· atravitz opened on Dec 11, 2025

fix all warnings shown in example notebooks

Status: Open.

#277 In OpenFreeEnergy/ExampleNotebooks;

· atravitz opened on Dec 10, 2025

Change RBFE example notebooks to use KartografAtomMapper?

Status: Open.

#250 In OpenFreeEnergy/ExampleNotebooks;

· hannahbaumann opened on Oct 24, 2025

pin google colab runtime

Status: Open.

#241 In OpenFreeEnergy/ExampleNotebooks;

· atravitz opened on Oct 21, 2025

add a How to change water model notebook

Status: Open.

#189 In OpenFreeEnergy/ExampleNotebooks;

· jthorton opened on Feb 11, 2025